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Works Cited & Online Links

Home > Other DNA Markers & Technologies > Techniques > Works Cited & Online Links
  1. Woolley, A. T., D. Hadley, P. Landre, A. J. deMello, R. A. Mathies, and M. A. Northrup. 1996. Functional integration of PCR amplification and capillary electrophoresis in a microfabricated DNA analysis device. Anal Chem 68 (23): 4081–86.
  2. Simpson, P. C., D. Roach, A. T. Woolley, T. Thorsen, R. Johnston, G. F. Sensabaugh, and R. A. Mathies. 1998. High-throughput genetic analysis using microfabricated 96-sample capillary array electrophoresis microplates. Proc Natl Acad Sci U S A 95 (5): 2256–61.
  3. Lagally, E. T., J. R. Scherer, R. G. Blazej, N. M. Toriello, B. A. Diep, M. Ramchandani, G. F. Sensabaugh, L. W. Riley, and R. A. Mathies. 2004. Integrated portable genetic analysis microsystem for pathogen/infectious disease detection. Anal Chem 76 (11): 3162–70.
  4. Kennedy, G. C., H. Matsuzaki, S. Dong, W. M. Liu, J. Huang, G. Liu, X. Su, et al. 2003. Large-scale genotyping of complex DNA. Nat Biotechnol 21 (10):1233–37.
  5. Matsuzaki, H., H. Loi, S. Dong, Y. Y. Tsai, J. Fang, J. Law, X. Di, et al. 2004. Parallel genotyping of over 10,000 SNPs using a one-primer assay on a high-density olignonucleotide array. Genome Res. 14 (3): 414–25.
  6. J. L. Read, M. C. Pirrung, L. Stryer, A. T. Lu, and D. Solas. 1991. Light-directed, spatially addressable parallel chemical synthesis. Science 251 (4995): 767–73.
  7. Fodor, S. P., R. P. Rava, X. C. Huang, A. C. Pease, C. P. Holmes, and C. L. Adams. 1993. Multiplexed biochemical assays with biological chips. Nature 364 (6437): 555–56.
  8. Pease, A. C., D. Solas, E. J. Sullivan, M. T. Cronin, C. P. Holmes, and S. P. Fodor. 1994. Light-generated oligonucleotide arrays for rapid DNA sequence analysis. Proc Natl Acad Sci U S A 91 (11): 5022–26.
  9. Lombardi, S. 2004. From genome sequence to genome understanding. Microarray Technology 25–31.
  10. Maitra, A., Y. Cohen, S. E. Gillespie, E. Mambo, N. Fukushima, M. O. Hoque, N. Shah, et al. 2004. The human MitoChip: A high-throughput sequencing microarray for mitochondrial mutation detection. Genome Res 14 (5): 812–19.
  11. DeFrancesco L. 2000. Nanogen does it with electricity. In Nanogen. Electronic publication at http://www.nanogen.com/publication/
    publication_detail.cfm?key=25    .
  12. Northrup, M. A., C. Gonzalez, D. Hadley, R. F. Hills, P. Landre, S. Lehew, R. Saiki, J. J. Sninsky, R. Watson, and R. Watson Jr. 1995. A MEMS-based miniature DNA analysis system. Paper submitted to Transducers ’95 conference in Stockholm, held June 25–29.http://www.osti.gov/bridge/servlets/purl/ 71671-tYyBIw/webviewable/(accessed August 30, 2006).
  13. Northrup, M. A., B. Benett, D. Hadley, P. Landre, S. Lehew, J. Richards, and P. Stratton. 1998. A miniature analytical instrument for nucleic acids based on micromachined silicon reaction chambers. Anal Chem 70 (5): 918–22.
  14. Belgrader, P., J. K. Smith, V. W. Weedn, and M. A. Nothrup. 1998. Rapid PCR for identity testing using a battery-powered miniature thermal cycler. J Forensic Sci 43 (2): 315–19.
  15. Roby,R. 2002. Automation for forensic mitochondrial DNA analysis. Presentation at Profiling PCR and Beyond: DNA Forensics conference held June 24–28, 2002, Washington, D.C., by Cambridge Healthtech Institute. Electronic abstract at http://www.healthtech.com/2002/fdx/.
  16. Montpetit, S. A., I. T. Fitch, and P. T. O’Donnell. 2005. A simple automated instrument for DNA extraction in forensic casework. J Forensic Sci 50 (3): 555–63.
  17. Beckman Coulter, Inc. 2005. Biomek® 2000 Laboratory Automation Workstation product information. http://www.beckmancoulter.com/products/instrument/
    automatedsolutions/biomek/biomek2000_inst_dcr.asp     (accessed August 30, 2006).
  18. Beckman Coulter, Inc. 2004 Promega’s DNA IQ* DNA Isolation System automated on the Beckman Coulter Biomek® 2000 Laboratory Workstation. In eLabNotebook, electronic publication at http://www.beckmancoulter.com/resourcecenter/
    eLabNotebook/ForensicID/dna-iq-bmk2000/index.htm     (accessed August 30, 2006).
  19. Greenspoon, S., and J. Ban. 2002. Robotic extraction of mock sexual assault samples using the Biomek® 2000 and the DNA IQ™ System. Profiles in DNA, Promega publication 5 (1): 3–5. http://www.promega.com/profiles/ 501/501_03.html.
  20. Crouse, C. A., Conover, J. 2003. Successful validation and implementation of (semi)-automation in a small caseworking laboratory. In Genetic Identity Conference Proceedings, Fourteenth International Symposium on Human Identification. .Phoenix:Promega Corporation. Available online at http://www.promega.com/geneticidproc/ussymp14proc/ oralpresentations/Crouse.pdf (accessed August 31, 2006).
  21. Astle, T. W., and Akowitz, A. 1996. Accuracy and tip carryover contamination in 96 well pipetting. Journal of Biomolecular Screening 1 (4): 211–16.
  22. Quality Assurance Standards for Convicted Offender DNA Databasing Laboratories (parts 1 and 2)
    http://www.fbi.gov/hq/lab/fsc/backissu/july2000/codis1a.htm
    http://www.fbi.gov/hq/lab/fsc/backissu/july2000/codis1b.htm
  23. Perlin, M. W. 2000. An expert system for scoring DNA database profiles. In Genetic Identity Conference Proceedings, Eleventh International Symposium on Human Identification. Phoenix: Promega Corporation. Available online at http://www.promega.com/geneticidproc/ussymp11proc/ content/perlin.pdf (accessed August 31, 2006).
  24. Leibelt, C. S., C. E. Boland, C. L. Brown, T. L. Hatch, Y. Daoudi, Y. Lou, and R. K. Roby. 2003. Verification of GeneMapper™ ID Software for STR analysis. Proceedings of the American Academy of Forensic Sciences conference held February 2003.
  25. Applied Biosystems. 2003. GeneMapper™ ID Software Version 3.1: Human Identification Analysis: User Guide, no. 4338775C, rev. C.
  26. The Forensic Science Service. 2006. The National DNA Database® fact sheet. http://www.forensic.gov.uk/forensic_t/inside/news/ docs/NDNAD.doc
  27. Kadish K, Kozlowski BE, Biega LA, Duceman BW. (2004) Validation study of the TrueAllele® automated data review system. Journal of Forensic Science, 49(4):660-667.
  28. Roby, R. K, B. Tincher, J. P. Jones, D. Elliotte, and T. Fenger. 2005. The National Institute of Justice’s Expert Systems Testbed Project. Abstract submitted to the Promega Corporation for presentation in September 2005.
  29. Perlin, M. W., and B. Szabady. 2001. Linear mixture analysis: A mathematical approach to resolving mixed DNA samples. J Forensic Sci 46 (6):1372–78.
  30. Karas, M., and F. Hillenkamp. 1988. Laser desorption ionization of proteins with molecular masses exceeding 10,000 daltons. Anal Chem 60 (20):2299–2301.
  31. Wu, K. J., T. A. Shaler, and C. H. Becker. 1994.Time-of-flight mass spectrometry of underivatized single-stranded DNA oligomers by matrix-assisted laser desorption. Anal Chem 66 (10): 1637–45. Also available online at http://pubs3.acs.org.proxy.usf.edu/acs/journals/ toc.page?incoden=ancham&indecade=1&involume=66&inissue=10.
  32. Neubert, Hendrick. 2004. Introduction to Matrix-Assisted Laser Desorption/Ionisation Time-of-Flight Mass Spectrometry (MALDI TOF MS) Department. King’s College London. http://www.kcl.ac.uk/ms-facility/maldi.html (accessed August 31, 2006).Introduction to Matrix-Assisted Laser Desorption/Ionisation Time-Of-Flight Mass Spectrometry (MALDI TOF MS)Department
  33. Morgan, C. 2004. Matrix assisted laser desorption ionisation time-of-flight mass spectrometry (MALDI-TOF-MS) with robot spotter. The University of Wales Institute of Biological Sciences. http://qbab.aber.ac.uk/roy/mss/tofspec.htm
  34. Butler, J. M., and C. H. Becker. 2001. Improved analysis of DNA short tandem repeats with time-of-flight mass spectrometry. National Institute of Justice science and technology research report: NCJ 188292.
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